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Table 1 Overview of bacterial species, corresponding genes, primers/probes, and DNA sequences

From: Real-time PCR analysis of fungal organisms and bacterial species at peri-implantitis sites

Species Gene Primer/probe Sequences (5′-3′)
Mycoplasma salivarium rpoB msali-F CCG TCA AAT GAT TTC GAT TGC
   msali-R GAA CTG CTT GAC GTT GCA TGT T
   msali-S Hex-ATG ATG CTA ACC GTG CGC TTA TGG GTG-BHQ1
Veillonella parvula 16S rDNA vpar-F TGC TAA TAC CGC ATA CGA TCT AAC C
   vpar-R GCT TAT AAA TAG AGG CCA CCT TTC A
   vpar-S HEX-CTA TCC TCG ATG CCG A-BHQ1
Staphylococcus aureus nuc saur-F CAA AGC ATC CTA AAA AAG GTG TAG AGA
   saur-R TTC AAT TTT CTT TGC ATT TTC TAC CA
   saur-S FAM-TTT TCG TAA ATG CAC TTG CTT CAG GAC CA-BHQ1
Porphyromonas gingivalis Arg-gingipain pgin-F CCT ACG TGT ACG GAC AGA GCT ATA
   pgin-R AGG ATC GCT CAG CGT AGC ATT
   pgin-S TexRed-TCG CCC GGG AAG AAC TTG TCT TCA-BHQ2
Parvimonas micra 16S rDNA pmic-F TCG AAC GTG ATT TTT GTG GAA A
   pmic-R GGT AGG TTG CTC ACG TGT TAC TCA
   pmic-S FAM-CCC GTT CGC CAC TT-BHQ1
Tannerella forsythia bspA tfor-F TCC CAA AGA CGC GGA TAT CA
   tfor-R ACG GTC GCG ATG TCA TTG T
   tfor-S FAM-CCG CGA CGT GAA ATG GTA TTC CTC-BHQ1
   tfor-S II HEX-TCG CGA CGT GAA ATG GTA TTC CTC-BHQ1